BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034B03SP1|AL429854
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 219 7e-57
>3x_Contig1682
Length = 16889
Score = 219 bits (109), Expect = 7e-57
Identities = 269/329 (81%)
Strand = Plus / Minus
Query: 267 aatgttatgagawagggatggtgtggatgttgtgtaggtttttgttagggattgtgtgat 326
|||||||||||| | ||||||| || || || |||| ||||||||| | ||| ||| ||
Sbjct: 4540 aatgttatgagatacggatggtctgcatcttctgtacctttttgttacgcattctgtcat 4481
Query: 327 ttggtgaaarttgattggtggaaatttggaggttttgaggttattttgtaaawwttagtg 386
|| ||||| ||||||||| ||||||| || ||||||| ||||||||||||| ||||||
Sbjct: 4480 ttcctgaaacttgattggtcgaaatttcgacgttttgacgttattttgtaaattttagtg 4421
Query: 387 atagawgaaattgaagaggtggttgawgtgtggtgggtaagtttaaatggaagagtagat 446
||||| ||||| || || || |||| ||| ||| || ||||||||| ||| |||||||
Sbjct: 4420 atagatcaaattcaacagctgcttgatctgtcgtgcgtcagtttaaatcgaacagtagat 4361
Query: 447 taawtgaaagaatgttgaggtgagggattggagattgaattgaagggagtaagaatgtgg 506
||| | |||||||||| |||| ||| |||||||||| |||| |||| |||||||||||||
Sbjct: 4360 taattcaaagaatgttcaggtcaggcattggagattcaattcaaggcagtaagaatgtgg 4301
Query: 507 atttgggagtgtttatagtaggggtgtwtggwtggagaggtgtagtttttwtttatwttt 566
|||||| ||| |||||| || || ||| || |||| || | |||||||| ||||| |||
Sbjct: 4300 atttggcagtctttatactacggctgtttgcttggacagctctagtttttttttattttt 4241
Query: 567 agagatgatggaattagatagtagtttta 595
| |||||||| ||||| ||| || |||||
Sbjct: 4240 acagatgatgcaattacatactactttta 4212
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4433
Number of Sequences: 1807
Number of extensions: 4433
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)